Publications Acknowledging the LFD

The Laboratory for Fluorescence Dynamics (LFD) should be acknowledged in any publications arising from the data collected in the LFD using the following text:

"The experiments reported in this paper were performed at the Laboratory for Fluorescence Dynamics (LFD) at the University of California, Irvine (UCI). The LFD is supported jointly by the National Center for Research Resources of the National Institutes of Health (PHS 5 P41-RR003155) and UCI."

2007

1. Kateri A Duncan and Steven C Huber.
   Sucrose synthase oligomerization and F-actin association are regulated by sucrose concentration and phosphorylation.
   Plant Cell Physiol. 2007; 48(11): 1612-23.
   Abstract, PubMed, Publisher, PDF 240 KB 

2006

2. Francisco J Cuevas, David M Jameson, and Carlos P Sotomayor.
   Modulation of reconstituted pig kidney Na+/K(+)-ATPase activity by cholesterol in endogenous lipid vesicles: role of lipid domains.
   Biochemistry. 2006; 45(46): 13855-68.
   Abstract, PubMed, Publisher, PDF 117 KB 
3. M Fidorra, L Duelund, C Leidy, A C Simonsen, and Luis A Bagatolli.
   Absence of fluid-ordered/fluid-disordered phase coexistence in ceramide/POPC mixtures containing cholesterol.
   Biophys J. 2006; 90(12): 4437-51.
   Abstract, PubMed, Publisher, PDF 603 KB 
4. Esther S Jeng, Anthonie E Moll, Amanda C Roy, Joseph B Gastala, and Michael S Strano.
   Detection of DNA hybridization using the near-infrared band-gap fluorescence of single-walled carbon nanotubes.
   Nano Lett. 2006; 6(3): 371-375.
   Abstract, PubMed, Publisher, PDF 167 KB 
5. Juewen Liu and Yi Lu.
   Fluorescent DNAzyme biosensors for metal ions based on catalytic molecular beacons.
   In Fluorescent Energy Transfer Nucleic Acid Probes (Methods in Molecular Biology, Vol. 335). By VV Didenko (Editors). Humana Press, pp. 275-288, 2006. ISBN: 9781588293800
   Abstract, PubMed, Publisher, ISBN.nu
6. Juewen Liu and Yi Lu.
   Multi-fluorophore fluorescence resonance energy transfer for probing nucleic acids structure and folding.
   In Fluorescent Energy Transfer Nucleic Acid Probes Designs and Protocols (Methods in Molecular Biology, Vol. 335). By VV Didenko (Editors). Humana Press, pp. 257-71, 2006. ISBN: 9781588293800
   Abstract, PubMed, Publisher, ISBN.nu

2005

7. Nandita Madhavan, Erin C Robert, and Mary S Gin.
   A highly active anion-selective aminocyclodextrin ion channel.
   Angew Chem Int Ed Engl. 2005; 44(46): 7584-7.
   Abstract, PubMed, Publisher, PDF 273 KB 
8. Ryan Woodyer, Huimin Zhao, and Wilfred A van der Donk.
   Mechanistic investigation of a highly active phosphite dehydrogenase mutant and its application for NADPH regeneration.
   FEBS J. 2005; 272(15): 3816-27.
   Abstract, PubMed, Publisher
9. Sivakumar V Aathimanikandan, Britto S Sandanaraj, Christopher G Arges, Christopher J Bardeen, and S Thayumanavan.
   Effect of guest molecule flexibility in access to dendritic interiors.
   Org Lett. 2005; 7(14): 2809-12.
   Abstract, PubMed, Publisher
10. Sophia Y Breusegem, Nabil Halaihel, Makoto Inoue, Hubert Zajicek, Eleanor Lederer, Nicholas P Barry, Victor Sorribas, and Moshe Levi.
    Acute and chronic changes in cholesterol modulate Na-Pi cotransport activity in OK cells.
    Am J Physiol Renal Physiol. 2005; 289(1): F154-65.
    Abstract, PubMed, Publisher, PDF 3.9 MB 
11. Heather A Relyea, Jennifer M Vrtis, Ryan Woodyer, Stacey A Rimkus, and Wilfred A van der Donk.
    Inhibition and pH dependence of phosphite dehydrogenase.
    Biochemistry. 2005; 44(17): 6640-9.
    Abstract, PubMed, Publisher
12. Ryan Woodyer, Joshua L Wheatley, Heather A Relyea, Stacey Rimkus, and Wilfred A van der Donk.
    Site-directed mutagenesis of active site residues of phosphite dehydrogenase.
    Biochemistry. 2005; 44(12): 4765-74.
    Abstract, PubMed, Publisher

2004

13. Cristina Arnulphi, Lihua Jin, M Alejandra Tricerri, and Ana Jonas.
    Enthalpy-driven apolipoprotein A-I and lipid bilayer interaction indicating protein penetration upon lipid binding.
    Biochemistry. 2004; 43(38): 12258-64.
    Abstract, PubMed, Publisher, PDF 93 KB 
14. Jacqueline E Payton, Richard J Perrin, Wendy S Woods, and Julia M George.
    Structural determinants of PLD2 inhibition by alpha-synuclein.
    J Mol Biol. 2004; 337(4): 1001-9.
    Abstract, PubMed, Publisher

2003

15. Juewen Liu and Yi Lu.
    Improving fluorescent DNAzyme biosensors by combining inter- and intramolecular quenchers.
    Anal Chem. 2003; 75(23): 6666-72.
    Abstract, PubMed, Publisher
16. Yi Lu, Juewen Liu, Jing Li, Peter J Bruesehoff, Caroline M-B Pavot, and Andrea K Brown.
    New highly sensitive and selective catalytic DNA biosensors for metal ions.
    Biosens Bioelectr. 2003; 18(5-6): 529-40.
    Abstract, PubMed, Publisher

2002

17. Juewen Liu and Yi Lu.
    FRET study of a trifluorophore-labeled DNAzyme.
    J Am Chem Soc. 2002; 124(51): 15208-16.
    Abstract, PubMed, ScienceDirect
18. A Smith, S Chaieb, A al Aql, M Alsalhi, and Munir H Nayfeh.
    Observation of assembly of fluorescent Si nanoparticles under the influence of electric current.
    J Nanosci Nanotechnol. 2002; 2(5): 471-3.
    Abstract, PubMed
19. Luis A Bagatolli, D D Binns, David M Jameson, and J P Albanesi.
    Activation of dynamin II by POPC in giant unilamellar vesicles: a two-photon fluorescence microscopy study.
    J Protein Chem. 2002; 21(6): 383-391.
    Abstract, PubMed, Publisher, PDF 585 KB 
20. Kaushik Nag, Jin-Si Pao, Robert R Harbottle, Fred Possmayer, Nils O Petersen, and Luis A Bagatolli.
    Segregation of saturated chain lipids in pulmonary surfactant films and bilayers.
    Biophys J. 2002; 82(4): 2041-51.
    Abstract, PubMed, Biophys J
21. Andrea K Behling Agree, M Alejandra Tricerri, Kirsten Arnvig McGuire, Shao-min Tian, and Ana Jonas.
    Folding and stability of the C-terminal half of apolipoprotein A-I examined with a Cys-specific fluorescence probe.
    Biochim Biophys Acta. 2002; 1594(2): 286-96.
    Abstract, PubMed, Publisher, PDF 275 KB 

2001

22. Ravi A Vijayendran and Deborah E Leckband.
    A quantitative assessment of heterogeneity for surface-immobilized proteins.
    Anal Chem. 2001; 73(3): 471-80.
    Abstract, PubMed, Publisher

2000

23. Carlos P Sotomayor, Luis F Aguilar, Francisco J Cuevas, Michael K Helms, and David M Jameson.
    Modulation of pig kidney Na+/K+-ATPase activity by cholesterol: role of hydration.
    Biochemistry. 2000; 39(35): 10928-35.
    Abstract, PubMed, Publisher, PDF 98 KB 
24. Sarah E Bondosa, Stephen B Sligar, and Jiri Jonas.
    High-pressure denaturation of apomyoglobin.
    Biochim Biophys Acta. 2000; 1480(1-2): 353-64.
    Abstract, PubMed, Publisher

1999

25. Sara Benci, Simona Vaccari, Andrea Mozzarelli, and Paul F Cook.
    Time-resolved fluorescence of O-acetylserine sulfhydrylase.
    Biochim Biophys Acta. 1999; 1429(2): 317-30.
    Abstract, PubMed, Publisher

1998

26. Scott M Blackman, David W Piston, and Albert H Beth.
    Oligomeric state of human erythrocyte band 3 measured by fluorescence resonance energy homotransfer.
    Biophys J. 1998; 75(2): 1117-1130.
    Abstract, PubMed, Biophys J, PDF 186 KB 
27. M K Helms, D A Malencik, and S R Anderson.
    Flexibility involving the intermolecular dityrosyl cross-links of enzymatically polymerized calmodulin.
    Biochemistry. 1998; 37(23): 8378-84.
    Abstract, PubMed, Publisher
28. E A Pyles and J C Lee.
    Escherichia coli cAMP receptor protein-DNA complexes. 2. Structural asymmetry of DNA bending.
    Biochemistry. 1998; 37(15): 5201-10.
    Abstract, PubMed, Publisher

1997

29. B Pilas and G Durack.
    A flow cytometric method for measurement of intracellular chloride concentration in lymphocytes using the halide-specific probe 6-methoxy-N-(3-sulfopropyl) quinolinium (SPQ).
    Cytometry. 1997; 28(4): 316-22.
    Abstract, PubMed, ScienceDirect
30. Michael K Helms, Charles E Petersen, Nadhipuram V Bhagavan, and David M Jameson.
    Time-resolved fluorescence studies on site-directed mutants of human serum albumin.
    FEBS Lett. 1997; 408(1): 67-70.
    Abstract, PubMed, Publisher, PDF 333 KB 
31. Donald J Weaver Jr, Gary Durack, and Edward W Voss Jr.
    Analysis of the intracellular processing of proteins: application of fluorescence polarization and a novel fluorescent probe.
    Cytometry. 1997; 28(1): 25-35.
    Abstract, PubMed, Publisher

1996

32. Jenny Carrero, W D Mallender, and Edward W Voss Jr.
    Anti-metatype antibody stabilization of Fv 4-4-20 variable domain dynamics.
    J Biol Chem. 1996; 271(19): 11247-52.
    Abstract, PubMed, J Biol Chem
33. W D Mallender, Jenny Carrero, and Edward W Voss Jr.
    Comparative properties of the single chain antibody and Fv derivatives of mAb 4-4-20. Relationship between interdomain interactions and the high affinity for fluorescein ligand.
    J Biol Chem. 1996; 271(10): 5338-46.
    Abstract, PubMed, J Biol Chem
34. Jenny Carrero and Edward W Voss Jr.
    Temperature and pH dependence of fluorescein binding within the monoclonal antibody 9-40 active site as monitored by hydrostatic pressure.
    J Biol Chem. 1996; 271(10): 5332-7.
    Abstract, PubMed, J Biol Chem
35. L J DeLong and J W Nichols.
    Time-resolved fluorescence anisotropy of fluorescent-labeled lysophospholipid and taurodeoxycholate aggregates.
    Biophys J. 1996; 70(3): 1466-71.
    Abstract, PubMed, Biophys J
36. Mark R Ehrhardt, Leonardo Erijman, Gregorio Weber, and A Joshua Wand.
    Molecular recognition by calmodulin: pressure-induced reorganization of a novel calmodulin-peptide complex.
    Biochemistry. 1996; 35(5): 1599-1605.
    Abstract, PubMed, Publisher, PDF 351 KB 

1993

37. Tatiana Coelho-Sampaio and Edward W Voss Jr.
    Pressure-induced dissociation of fluorescein from the anti-fluorescein single-chain antibody 4-4-20.
    Biochemistry. 1993; 32(41): 10929-35.
    Abstract, PubMed, Publisher

1992

38. Catherine A Royer, T Ropp, and Suzanne F Scarlata.
    Solution studies of the interactions between the histone core proteins and DNA using fluorescence spectroscopy.
    Biophys Chem. 1992; 43(2): 197-211.
    Abstract, PubMed
39. W D Bedzyk, C A Swindlehurst, and Edward W Voss Jr.
    Relative binding properties of fluorescein and 9-hydroxyphenylfluoron (HPF) with murine monoclonal anti-fluorescein antibodies.
    Biochim Biophys Acta. 1992; 1119(1): 27-34.
    Abstract, PubMed

1991

40. T Coelho-Sampaio, Sérgio T Ferreira, G Benaim, and A Vieyra.
    Dissociation of purified erythrocyte Ca(2+)-ATPase by hydrostatic pressure.
    J Biol Chem. 1991; 266(33): 22266-72.
    Abstract, PubMed, J Biol Chem
41. G Nemecz and F Schroeder.
    Selective binding of cholesterol by recombinant fatty acid binding proteins.
    J Biol Chem. 1991; 266(26): 17180-6.
    Abstract, PubMed, J Biol Chem
42. G Nemecz, J R Jefferson, and F Schroeder.
    Polyene fatty acid interactions with recombinant intestinal and liver fatty acid-binding proteins. Spectroscopic studies.
    J Biol Chem. 1991; 266(26): 17112-23.
    Abstract, PubMed, J Biol Chem
43. C A Swindlehurst and Edward W Voss Jr.
    Fluorescence measurements of immune complexes of Mab 4-4-20 with isomeric haptens.
    Biophys J. 1991; 59(3): 619-28.
    Abstract, PubMed, Biophys J
44. P S Stayton and Stephen G Sligar.
    Structural microheterogeneity of a tryptophan residue required for efficient biological electron transfer between putidaredoxin and cytochrome P-450cam.
    Biochemistry. 1991; 30(7): 1845-51.
    Abstract, PubMed, Publisher

1990

45. J H Wald, E S Krul, and Ana Jonas.
    Structure of apolipoprotein A-I in three homogeneous, reconstituted high density lipoprotein particles.
    J Biol Chem. 1990; 265(32): 20037-43.
    Abstract, PubMed, J Biol Chem
46. R I MacDonald.
    Characteristics of self-quenching of the fluorescence of lipid-conjugated rhodamine in membranes.
    J Biol Chem. 1990; 265(23): 13533-9.
    Abstract, PubMed, J Biol Chem
47. Y L Kao, P L Chong, and C H Huang.
    Time-resolved fluorometric and differential scanning calorimetric investigation of dehydroergosterol in 1-stearoyl-2-caprylphosphatidylcholine bilayers.
    Biochemistry. 1990; 29(5): 1315-22.
    Abstract, PubMed, Publisher

1989

48. Sérgio T Ferreira.
    Fluorescence studies of the conformational dynamics of parvalbumin in solution: lifetime and rotational motions of the single tryptophan residue.
    Biochemistry. 1989; 28(26): 10066-10072.
    Abstract, PubMed, Publisher, PDF 875 KB 

1988

49. Mary Ann Dombrink-Kurtzman and Edward W Voss Jr.
    Cryoprecipitation properties of a high-affinity monoclonal IgM anti-fluorescyl antibody.
    Mol Immunol. 1988; 25(12): 1309-20.
    Abstract, PubMed, Publisher, PDF 1472 KB 
50. Patrick S Stayton, Mark T Fisher, and Stephen G Sligar.
    Determination of cytochrome b5 association reactions. Characterization of metmyoglobin and cytochrome P-450cam binding to genetically engineered cytochrome B5.
    J Biol Chem. 1988; 263(27): 13544-8.
    Abstract, PubMed, J Biol Chem, PDF 671 KB